Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL21A1Q96P44 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.53■□□□□ 0.72
COL21A1Q96P44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL21A1Q96P44 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL21A1Q96P44 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL21A1Q96P44 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.53■□□□□ 0.72
COL21A1Q96P44 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL21A1Q96P44 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.52■□□□□ 0.72
COL21A1Q96P44 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
COL21A1Q96P44 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.52■□□□□ 0.72
COL21A1Q96P44 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL21A1Q96P44 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL21A1Q96P44 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.52■□□□□ 0.71
COL21A1Q96P44 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL21A1Q96P44 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL21A1Q96P44 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL21A1Q96P44 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL21A1Q96P44 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 NTF6G-201ENST00000591094 616 ntBASIC19.51■□□□□ 0.71
COL21A1Q96P44 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL21A1Q96P44 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL21A1Q96P44 AC004854.2-201ENST00000608450 1441 ntBASIC19.51■□□□□ 0.71
COL21A1Q96P44 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 AP004607.4-201ENST00000530158 1459 ntBASIC19.5■□□□□ 0.71
COL21A1Q96P44 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 EEF1DP3-203ENST00000566025 782 ntBASIC19.5■□□□□ 0.71
COL21A1Q96P44 AC053503.5-201ENST00000601508 636 ntBASIC19.5■□□□□ 0.71
COL21A1Q96P44 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.5■□□□□ 0.71
COL21A1Q96P44 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL21A1Q96P44 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.5■□□□□ 0.71
COL21A1Q96P44 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms