Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 CCDC92B-201ENST00000575506 885 ntBASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 PLK5-205ENST00000642079 1969 ntBASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 AC061975.6-201ENST00000579045 1553 ntBASIC18.55■□□□□ 0.56
FOXN4Q96NZ1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXN4Q96NZ1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 AC073130.3-201ENST00000624389 2278 ntBASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN4Q96NZ1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 AC079140.4-201ENST00000507448 529 ntBASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
FOXN4Q96NZ1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 LINC02228-203ENST00000641970 1355 ntBASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.52■□□□□ 0.55
FOXN4Q96NZ1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 LINC01006-201ENST00000333319 2292 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 KRT18P14-201ENST00000534205 1250 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 EEF1DP3-203ENST00000566025 782 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 AL137784.2-201ENST00000607332 1000 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 AC092667.1-201ENST00000434301 2586 ntBASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXN4Q96NZ1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms