Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 AL355075.4-201ENST00000554988 638 ntBASIC24.52■■□□□ 1.52
CDCA5Q96FF9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.52■■□□□ 1.52
CDCA5Q96FF9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CDCA5Q96FF9 AL135905.2-201ENST00000584934 1404 ntBASIC24.52■■□□□ 1.52
CDCA5Q96FF9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 AC110285.5-201ENST00000611501 352 ntBASIC24.51■■□□□ 1.51
CDCA5Q96FF9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.51■■□□□ 1.51
CDCA5Q96FF9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 KRASP1-201ENST00000407852 552 ntBASIC24.5■■□□□ 1.51
CDCA5Q96FF9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 C2orf69P4-201ENST00000565394 541 ntBASIC24.5■■□□□ 1.51
CDCA5Q96FF9 AL445228.2-201ENST00000605589 952 ntBASIC24.5■■□□□ 1.51
CDCA5Q96FF9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.5■■□□□ 1.51
CDCA5Q96FF9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDCA5Q96FF9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 AC120498.8-201ENST00000614275 531 ntBASIC24.48■■□□□ 1.51
CDCA5Q96FF9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDCA5Q96FF9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 PRKY-204ENST00000533551 1019 ntBASIC24.47■■□□□ 1.51
CDCA5Q96FF9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.47■■□□□ 1.51
CDCA5Q96FF9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms