Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AC233992.3-201ENST00000607491 485 ntBASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 AC007225.1-201ENST00000566331 1836 ntBASIC19.88■□□□□ 0.77
VPS33AQ96AX1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS33AQ96AX1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 AL136116.3-201ENST00000402907 1138 ntBASIC19.87■□□□□ 0.77
VPS33AQ96AX1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 AC126544.1-201ENST00000580842 1059 ntBASIC19.87■□□□□ 0.77
VPS33AQ96AX1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS33AQ96AX1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 AC009237.3-201ENST00000393279 1427 ntBASIC19.86■□□□□ 0.77
VPS33AQ96AX1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 UNC93B3-201ENST00000308076 687 ntBASIC19.86■□□□□ 0.77
VPS33AQ96AX1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS33AQ96AX1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS33AQ96AX1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 AC020907.5-201ENST00000624372 1936 ntBASIC19.84■□□□□ 0.77
VPS33AQ96AX1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 IGHV3-19-201ENST00000521488 291 ntBASIC19.84■□□□□ 0.77
VPS33AQ96AX1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms