Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 AC105020.6-201ENST00000621523 1217 ntBASIC21.41■■□□□ 1.02
SMARCD2Q92925 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
SMARCD2Q92925 AC116050.2-201ENST00000612102 1779 ntBASIC21.41■■□□□ 1.02
SMARCD2Q92925 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMARCD2Q92925 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.4■■□□□ 1.02
SMARCD2Q92925 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SMARCD2Q92925 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SMARCD2Q92925 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.4■■□□□ 1.02
SMARCD2Q92925 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.4■■□□□ 1.02
SMARCD2Q92925 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 SOX15-203ENST00000570788 1093 ntBASIC21.4■■□□□ 1.02
SMARCD2Q92925 FAM197Y4-202ENST00000622692 608 ntBASIC21.4■■□□□ 1.02
SMARCD2Q92925 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMARCD2Q92925 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
SMARCD2Q92925 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMARCD2Q92925 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 C1QBPP2-201ENST00000528754 825 ntBASIC21.39■■□□□ 1.01
SMARCD2Q92925 RN7SL471P-201ENST00000580476 299 ntBASIC21.39■■□□□ 1.01
SMARCD2Q92925 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
SMARCD2Q92925 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMARCD2Q92925 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCD2Q92925 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCD2Q92925 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCD2Q92925 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCD2Q92925 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCD2Q92925 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCD2Q92925 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.36■■□□□ 1.01
SMARCD2Q92925 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.36■■□□□ 1.01
SMARCD2Q92925 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCD2Q92925 MIR718-201ENST00000390190 70 ntBASIC21.36■■□□□ 1.01
SMARCD2Q92925 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms