Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS1Q92902 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HPS1Q92902 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS1Q92902 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS1Q92902 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HPS1Q92902 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HPS1Q92902 BX842568.3-201ENST00000418104 571 ntBASIC18.79■□□□□ 0.6
HPS1Q92902 MIR3181-201ENST00000578512 73 ntBASIC18.79■□□□□ 0.6
HPS1Q92902 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS1Q92902 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS1Q92902 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.79■□□□□ 0.6
HPS1Q92902 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS1Q92902 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS1Q92902 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HPS1Q92902 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.78■□□□□ 0.6
HPS1Q92902 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.78■□□□□ 0.6
HPS1Q92902 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HPS1Q92902 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HPS1Q92902 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
HPS1Q92902 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HPS1Q92902 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS1Q92902 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.77■□□□□ 0.6
HPS1Q92902 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
HPS1Q92902 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
HPS1Q92902 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
HPS1Q92902 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
HPS1Q92902 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.77■□□□□ 0.6
HPS1Q92902 pRNA.6-201ENST00000610482 90 ntBASIC18.77■□□□□ 0.6
HPS1Q92902 pRNA.5-201ENST00000612139 90 ntBASIC18.77■□□□□ 0.6
HPS1Q92902 pRNA.11-201ENST00000618423 90 ntBASIC18.77■□□□□ 0.6
HPS1Q92902 pRNA.13-201ENST00000619112 90 ntBASIC18.77■□□□□ 0.6
HPS1Q92902 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.77■□□□□ 0.6
HPS1Q92902 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS1Q92902 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
HPS1Q92902 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPS1Q92902 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPS1Q92902 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.77■□□□□ 0.59
HPS1Q92902 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPS1Q92902 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
HPS1Q92902 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 AL353803.4-201ENST00000565882 1934 ntBASIC18.76■□□□□ 0.59
HPS1Q92902 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
HPS1Q92902 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.76■□□□□ 0.59
HPS1Q92902 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.76■□□□□ 0.59
HPS1Q92902 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 AC006455.2-201ENST00000429931 906 ntBASIC18.76■□□□□ 0.59
HPS1Q92902 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.76■□□□□ 0.59
HPS1Q92902 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HPS1Q92902 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS1Q92902 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HPS1Q92902 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
HPS1Q92902 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HPS1Q92902 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HPS1Q92902 AL499627.2-201ENST00000606283 725 ntBASIC18.75■□□□□ 0.59
HPS1Q92902 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 AC098818.2-201ENST00000564925 2320 ntBASIC18.75■□□□□ 0.59
HPS1Q92902 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS1Q92902 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms