Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 FP700111.2-201ENST00000619190 1892 ntBASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 SUDS3P1-201ENST00000505831 966 ntBASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 AC053503.5-201ENST00000601508 636 ntBASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
ATG4AQ8WYN0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 MIR6084-201ENST00000622012 110 ntBASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
ATG4AQ8WYN0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATG4AQ8WYN0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 AC020907.5-201ENST00000624372 1936 ntBASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATG4AQ8WYN0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 AP004607.4-201ENST00000530158 1459 ntBASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATG4AQ8WYN0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.43■■□□□ 1.02
ATG4AQ8WYN0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms