Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AL050303.2-201ENST00000619798 666 ntBASIC25.72■■□□□ 1.71
SSH3Q8TE77 AC011484.1-201ENST00000377652 1995 ntBASIC25.72■■□□□ 1.71
SSH3Q8TE77 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSH3Q8TE77 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SSH3Q8TE77 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SSH3Q8TE77 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SSH3Q8TE77 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.71■■□□□ 1.71
SSH3Q8TE77 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.71■■□□□ 1.71
SSH3Q8TE77 PLK5-205ENST00000642079 1969 ntBASIC25.71■■□□□ 1.71
SSH3Q8TE77 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
SSH3Q8TE77 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SSH3Q8TE77 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SSH3Q8TE77 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.7
SSH3Q8TE77 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.7■■□□□ 1.7
SSH3Q8TE77 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSH3Q8TE77 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSH3Q8TE77 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSH3Q8TE77 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSH3Q8TE77 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.69■■□□□ 1.7
SSH3Q8TE77 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSH3Q8TE77 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSH3Q8TE77 AC121338.2-201ENST00000622535 1744 ntBASIC25.68■■□□□ 1.7
SSH3Q8TE77 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 CYP2T1P-201ENST00000432607 1285 ntBASIC25.68■■□□□ 1.7
SSH3Q8TE77 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 AC005181.1-201ENST00000604782 1256 ntBASIC25.68■■□□□ 1.7
SSH3Q8TE77 FAM21FP-204ENST00000608637 956 ntBASIC25.68■■□□□ 1.7
SSH3Q8TE77 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.68■■□□□ 1.7
SSH3Q8TE77 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SSH3Q8TE77 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 AC007322.3-201ENST00000426526 701 ntBASIC25.67■■□□□ 1.7
SSH3Q8TE77 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.67■■□□□ 1.7
SSH3Q8TE77 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.67■■□□□ 1.7
SSH3Q8TE77 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.67■■□□□ 1.7
SSH3Q8TE77 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSH3Q8TE77 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 AC090192.1-201ENST00000517740 490 ntBASIC25.66■■□□□ 1.7
SSH3Q8TE77 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSH3Q8TE77 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.66■■□□□ 1.7
SSH3Q8TE77 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 MIR663A-201ENST00000385250 93 ntBASIC25.65■■□□□ 1.7
SSH3Q8TE77 CDV3P1-201ENST00000471403 739 ntBASIC25.65■■□□□ 1.7
SSH3Q8TE77 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SSH3Q8TE77 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 RARRES2P4-201ENST00000514074 484 ntBASIC25.65■■□□□ 1.7
SSH3Q8TE77 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SSH3Q8TE77 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SSH3Q8TE77 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SSH3Q8TE77 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms