Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCHCR1Q8TD31 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCHCR1Q8TD31 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 PLK5-205ENST00000642079 1969 ntBASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 YBX1P1-201ENST00000445822 960 ntBASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCHCR1Q8TD31 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.52■■□□□ 1.03
CCHCR1Q8TD31 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.52■■□□□ 1.03
CCHCR1Q8TD31 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCHCR1Q8TD31 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CCHCR1Q8TD31 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCHCR1Q8TD31 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 AP005212.1-201ENST00000581547 1997 ntBASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 AC123595.1-201ENST00000440769 1046 ntBASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCHCR1Q8TD31 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 AC121338.2-201ENST00000622535 1744 ntBASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCHCR1Q8TD31 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 LINC02228-203ENST00000641970 1355 ntBASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.49■■□□□ 1.03
CCHCR1Q8TD31 AC055733.4-201ENST00000638462 1354 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms