Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
LINC00308Q8TCZ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 AL034346.1-201ENST00000568244 1277 ntBASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00308Q8TCZ7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 BHLHE23-202ENST00000612929 1109 ntBASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 U85056.1-201ENST00000616429 682 ntBASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00308Q8TCZ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00308Q8TCZ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms