Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 KRT19P1-201ENST00000405746 1186 ntBASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH19Q8TAB3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 AC011484.1-201ENST00000377652 1995 ntBASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH19Q8TAB3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH19Q8TAB3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDH19Q8TAB3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH19Q8TAB3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
PCDH19Q8TAB3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 AC245052.3-201ENST00000450182 901 ntBASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 AC090192.1-201ENST00000517740 490 ntBASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH19Q8TAB3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH19Q8TAB3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 AC004911.1-201ENST00000416316 871 ntBASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms