Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD2Q8NHY2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD2Q8NHY2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.46■□□□□ 0.87
RFWD2Q8NHY2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.46■□□□□ 0.87
RFWD2Q8NHY2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD2Q8NHY2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
RFWD2Q8NHY2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.45■□□□□ 0.87
RFWD2Q8NHY2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 AP006587.3-201ENST00000525742 1516 ntBASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 MIR3181-201ENST00000578512 73 ntBASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD2Q8NHY2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD2Q8NHY2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD2Q8NHY2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD2Q8NHY2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 FP700111.2-201ENST00000619190 1892 ntBASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 MIR3621-201ENST00000580529 85 ntBASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD2Q8NHY2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD2Q8NHY2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms