Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIMC1Q8NDZ2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIMC1Q8NDZ2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 AC008175.2-201ENST00000612840 297 ntBASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIMC1Q8NDZ2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 KRT19P1-201ENST00000405746 1186 ntBASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 UBE2DNL-204ENST00000602536 740 ntBASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.48■□□□□ 0.71
SIMC1Q8NDZ2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIMC1Q8NDZ2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 POU5F1P4-201ENST00000413175 1085 ntBASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
SIMC1Q8NDZ2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 AL391422.3-201ENST00000603791 2761 ntBASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms