Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF169Q8NCN4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 PRORSD1P-201ENST00000295112 541 ntBASIC22.58■■□□□ 1.21
RNF169Q8NCN4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF169Q8NCN4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF169Q8NCN4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.58■■□□□ 1.2
RNF169Q8NCN4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF169Q8NCN4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF169Q8NCN4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 CYP2T3P-201ENST00000601990 817 ntBASIC22.55■■□□□ 1.2
RNF169Q8NCN4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF169Q8NCN4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 AC242852.2-201ENST00000615738 1807 ntBASIC22.54■■□□□ 1.2
RNF169Q8NCN4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 AC093827.2-201ENST00000512654 315 ntBASIC22.54■■□□□ 1.2
RNF169Q8NCN4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 AC006058.3-201ENST00000606217 1069 ntBASIC22.54■■□□□ 1.2
RNF169Q8NCN4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RNF169Q8NCN4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF169Q8NCN4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms