Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C3orf56Q8N813 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.24■□□□□ 0.19
C3orf56Q8N813 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C3orf56Q8N813 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.23■□□□□ 0.19
C3orf56Q8N813 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.22■□□□□ 0.19
C3orf56Q8N813 KRT18P35-201ENST00000510488 1269 ntBASIC16.22■□□□□ 0.19
C3orf56Q8N813 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 CD177P1-201ENST00000606252 935 ntBASIC16.22■□□□□ 0.19
C3orf56Q8N813 AL023875.1-201ENST00000640777 796 ntBASIC16.22■□□□□ 0.19
C3orf56Q8N813 AC097493.4-201ENST00000641197 219 ntBASIC16.22■□□□□ 0.19
C3orf56Q8N813 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
C3orf56Q8N813 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C3orf56Q8N813 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AC091799.1-201ENST00000422823 811 ntBASIC16.21■□□□□ 0.19
C3orf56Q8N813 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AL590326.2-201ENST00000625139 305 ntBASIC16.21■□□□□ 0.19
C3orf56Q8N813 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
C3orf56Q8N813 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C3orf56Q8N813 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C3orf56Q8N813 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C3orf56Q8N813 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 PRKY-204ENST00000533551 1019 ntBASIC16.2■□□□□ 0.18
C3orf56Q8N813 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 AL049597.2-201ENST00000565575 961 ntBASIC16.2■□□□□ 0.18
C3orf56Q8N813 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms