Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PAF1Q8N7H5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PAF1Q8N7H5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
PAF1Q8N7H5 SLC7A5P2-201ENST00000553010 536 ntBASIC21.21■□□□□ 0.99
PAF1Q8N7H5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 AC061975.6-201ENST00000579045 1553 ntBASIC21.21■□□□□ 0.99
PAF1Q8N7H5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PAF1Q8N7H5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PAF1Q8N7H5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 LINC00565-201ENST00000562710 2331 ntBASIC21.2■□□□□ 0.98
PAF1Q8N7H5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 MYCNOS-205ENST00000641950 531 ntBASIC21.2■□□□□ 0.98
PAF1Q8N7H5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PAF1Q8N7H5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms