Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PCDH20Q8N6Y1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 AC026310.3-201ENST00000625186 2373 ntBASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH20Q8N6Y1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 HLA-L-209ENST00000420110 1011 ntBASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 AL162412.1-201ENST00000567129 965 ntBASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 AL591742.1-201ENST00000604433 565 ntBASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 AL121832.2-201ENST00000610979 668 ntBASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
PCDH20Q8N6Y1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH20Q8N6Y1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDH20Q8N6Y1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH20Q8N6Y1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PCDH20Q8N6Y1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 GPX1P1-201ENST00000388829 606 ntBASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 CYP2T1P-201ENST00000432607 1285 ntBASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH20Q8N6Y1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 AC133552.2-202ENST00000575694 574 ntBASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDH20Q8N6Y1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 AC104771.1-201ENST00000603335 964 ntBASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms