Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.22■□□□□ 0.35
C11orf42Q8N5U0 UBE2DNL-204ENST00000602536 740 ntBASIC17.22■□□□□ 0.35
C11orf42Q8N5U0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf42Q8N5U0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf42Q8N5U0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf42Q8N5U0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 AC092666.2-201ENST00000613287 246 ntBASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf42Q8N5U0 KRT16P2-201ENST00000414673 1423 ntBASIC17.21■□□□□ 0.34
C11orf42Q8N5U0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C11orf42Q8N5U0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 KRT18P11-201ENST00000435214 1283 ntBASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 MYCNOS-205ENST00000641950 531 ntBASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 AC026310.3-201ENST00000625186 2373 ntBASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.19■□□□□ 0.34
C11orf42Q8N5U0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 AC016769.1-201ENST00000409132 1010 ntBASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 AL137784.2-201ENST00000607332 1000 ntBASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 AC092667.1-201ENST00000434301 2586 ntBASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C11orf42Q8N5U0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms