Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.08■■□□□ 1.12
TTC39CQ8N584 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TTC39CQ8N584 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TTC39CQ8N584 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.07■■□□□ 1.12
TTC39CQ8N584 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 FAM21FP-204ENST00000608637 956 ntBASIC22.07■■□□□ 1.12
TTC39CQ8N584 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.07■■□□□ 1.12
TTC39CQ8N584 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39CQ8N584 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC39CQ8N584 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 AC073111.5-205ENST00000641717 521 ntBASIC22.06■■□□□ 1.12
TTC39CQ8N584 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC39CQ8N584 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39CQ8N584 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 AC121338.2-201ENST00000622535 1744 ntBASIC22.05■■□□□ 1.12
TTC39CQ8N584 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39CQ8N584 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39CQ8N584 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.04■■□□□ 1.12
TTC39CQ8N584 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 AC026185.1-201ENST00000445748 174 ntBASIC22.04■■□□□ 1.12
TTC39CQ8N584 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 AC068338.2-201ENST00000563278 1430 ntBASIC22.04■■□□□ 1.12
TTC39CQ8N584 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39CQ8N584 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39CQ8N584 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TTC39CQ8N584 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.03■■□□□ 1.12
TTC39CQ8N584 CDCA4P2-201ENST00000441182 718 ntBASIC22.03■■□□□ 1.12
TTC39CQ8N584 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TTC39CQ8N584 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39CQ8N584 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39CQ8N584 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39CQ8N584 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 AC007375.3-201ENST00000600936 2314 ntBASIC22.02■■□□□ 1.12
TTC39CQ8N584 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TTC39CQ8N584 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39CQ8N584 AC069236.1-201ENST00000604339 616 ntBASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms