Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 AC091874.3-201ENST00000512672 1195 ntBASIC22.45■■□□□ 1.18
VPS52Q8N1B4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS52Q8N1B4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 AC003102.1-202ENST00000563394 1796 ntBASIC22.43■■□□□ 1.18
VPS52Q8N1B4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 DUSP5P2-201ENST00000426873 1033 ntBASIC22.43■■□□□ 1.18
VPS52Q8N1B4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS52Q8N1B4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 ESRRAP1-201ENST00000400596 1257 ntBASIC22.42■■□□□ 1.18
VPS52Q8N1B4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
VPS52Q8N1B4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS52Q8N1B4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms