Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.27■■□□□ 1
SIX5Q8N196 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.27■■□□□ 1
SIX5Q8N196 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SIX5Q8N196 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.27■■□□□ 1
SIX5Q8N196 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.27■■□□□ 1
SIX5Q8N196 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.27■□□□□ 0.99
SIX5Q8N196 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SIX5Q8N196 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.26■□□□□ 0.99
SIX5Q8N196 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.26■□□□□ 0.99
SIX5Q8N196 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.26■□□□□ 0.99
SIX5Q8N196 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.26■□□□□ 0.99
SIX5Q8N196 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.26■□□□□ 0.99
SIX5Q8N196 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.26■□□□□ 0.99
SIX5Q8N196 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIX5Q8N196 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.26■□□□□ 0.99
SIX5Q8N196 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.25■□□□□ 0.99
SIX5Q8N196 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIX5Q8N196 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
SIX5Q8N196 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIX5Q8N196 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIX5Q8N196 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIX5Q8N196 AC087499.1-201ENST00000418141 1075 ntBASIC21.25■□□□□ 0.99
SIX5Q8N196 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.25■□□□□ 0.99
SIX5Q8N196 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.25■□□□□ 0.99
SIX5Q8N196 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.25■□□□□ 0.99
SIX5Q8N196 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SIX5Q8N196 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SIX5Q8N196 AL049637.2-201ENST00000641778 930 ntBASIC21.25■□□□□ 0.99
SIX5Q8N196 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIX5Q8N196 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.25■□□□□ 0.99
SIX5Q8N196 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SIX5Q8N196 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SIX5Q8N196 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SIX5Q8N196 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.24■□□□□ 0.99
SIX5Q8N196 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.24■□□□□ 0.99
SIX5Q8N196 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.24■□□□□ 0.99
SIX5Q8N196 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.24■□□□□ 0.99
SIX5Q8N196 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.24■□□□□ 0.99
SIX5Q8N196 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.24■□□□□ 0.99
SIX5Q8N196 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.24■□□□□ 0.99
SIX5Q8N196 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIX5Q8N196 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SIX5Q8N196 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.23■□□□□ 0.99
SIX5Q8N196 AC003102.1-202ENST00000563394 1796 ntBASIC21.23■□□□□ 0.99
SIX5Q8N196 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.23■□□□□ 0.99
SIX5Q8N196 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SIX5Q8N196 MIR4785-201ENST00000585005 73 ntBASIC21.23■□□□□ 0.99
SIX5Q8N196 AP001412.1-201ENST00000608405 714 ntBASIC21.23■□□□□ 0.99
SIX5Q8N196 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.23■□□□□ 0.99
SIX5Q8N196 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX5Q8N196 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SIX5Q8N196 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SIX5Q8N196 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.22■□□□□ 0.99
SIX5Q8N196 TSPY15P-201ENST00000457163 923 ntBASIC21.22■□□□□ 0.99
SIX5Q8N196 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SIX5Q8N196 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.22■□□□□ 0.99
SIX5Q8N196 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.22■□□□□ 0.99
SIX5Q8N196 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SIX5Q8N196 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.22■□□□□ 0.99
SIX5Q8N196 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms