Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 KRT19P1-201ENST00000405746 1186 ntBASIC18.81■□□□□ 0.6
ATG4DQ86TL0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATG4DQ86TL0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 AC090192.1-201ENST00000517740 490 ntBASIC18.8■□□□□ 0.6
ATG4DQ86TL0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATG4DQ86TL0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATG4DQ86TL0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 SLC7A5P1-201ENST00000568957 537 ntBASIC18.78■□□□□ 0.6
ATG4DQ86TL0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATG4DQ86TL0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATG4DQ86TL0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATG4DQ86TL0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATG4DQ86TL0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATG4DQ86TL0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms