Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL4BQ6ZWI9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 AC055733.4-201ENST00000638462 1354 ntBASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 AC010542.4-201ENST00000563151 1910 ntBASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFPL4BQ6ZWI9 LINC02228-203ENST00000641970 1355 ntBASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFPL4BQ6ZWI9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 AC123595.1-201ENST00000440769 1046 ntBASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL4BQ6ZWI9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 AC003102.1-202ENST00000563394 1796 ntBASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL4BQ6ZWI9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms