Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 AC008175.2-201ENST00000612840 297 ntBASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC1Q6VVB1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 KRT18P20-201ENST00000548986 1279 ntBASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 NTF6G-201ENST00000591094 616 ntBASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NHLRC1Q6VVB1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 KRT16P2-201ENST00000414673 1423 ntBASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.58■□□□□ 0.57
NHLRC1Q6VVB1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 RARRES2P6-201ENST00000567333 442 ntBASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 RARRES2P11-201ENST00000635158 484 ntBASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.58■□□□□ 0.56
NHLRC1Q6VVB1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NHLRC1Q6VVB1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 SLC7A5P1-201ENST00000568957 537 ntBASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC1Q6VVB1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms