Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 MIR6084-201ENST00000622012 110 ntBASIC21.09■□□□□ 0.97
CASC4Q6P4E1 AL358852.1-201ENST00000623174 1268 ntBASIC21.09■□□□□ 0.97
CASC4Q6P4E1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 AC121338.2-201ENST00000622535 1744 ntBASIC21.09■□□□□ 0.97
CASC4Q6P4E1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASC4Q6P4E1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.08■□□□□ 0.97
CASC4Q6P4E1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.08■□□□□ 0.97
CASC4Q6P4E1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 SLC25A24-204ENST00000569674 2357 ntBASIC21.08■□□□□ 0.96
CASC4Q6P4E1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CASC4Q6P4E1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
CASC4Q6P4E1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASC4Q6P4E1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 EEF1DP3-203ENST00000566025 782 ntBASIC21.06■□□□□ 0.96
CASC4Q6P4E1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.06■□□□□ 0.96
CASC4Q6P4E1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASC4Q6P4E1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms