Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
CDC42BPAQ5VT25 AC116050.2-201ENST00000612102 1779 ntBASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 MIR718-201ENST00000390190 70 ntBASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 SNORA78-201ENST00000459373 127 ntBASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.7■■■□□ 2.67
CDC42BPAQ5VT25 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CDC42BPAQ5VT25 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CDC42BPAQ5VT25 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CDC42BPAQ5VT25 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CDC42BPAQ5VT25 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.69■■■□□ 2.66
CDC42BPAQ5VT25 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 AC073912.3-201ENST00000624414 853 ntBASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPAQ5VT25 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.67■■■□□ 2.66
CDC42BPAQ5VT25 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 SERF2-207ENST00000409614 582 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 RN7SL471P-201ENST00000580476 299 ntBASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 Z99916.2-201ENST00000604037 246 ntBASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPAQ5VT25 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPAQ5VT25 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 AC124016.1-201ENST00000609552 612 ntBASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPAQ5VT25 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms