Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 MMP23A-201ENST00000234610 1017 ntBASIC18.23■□□□□ 0.51
LRRK2Q5S007 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 WWOX-216ENST00000569818 525 ntBASIC18.23■□□□□ 0.51
LRRK2Q5S007 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 RBM17P1-201ENST00000453646 1190 ntBASIC18.22■□□□□ 0.51
LRRK2Q5S007 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 FAM21FP-204ENST00000608637 956 ntBASIC18.22■□□□□ 0.51
LRRK2Q5S007 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 KRT18P68-201ENST00000392293 1000 ntBASIC18.22■□□□□ 0.51
LRRK2Q5S007 AL355355.2-201ENST00000442321 338 ntBASIC18.22■□□□□ 0.51
LRRK2Q5S007 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 AL358472.4-201ENST00000633140 710 ntBASIC18.22■□□□□ 0.51
LRRK2Q5S007 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRK2Q5S007 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRK2Q5S007 LINC01568-207ENST00000641790 1380 ntBASIC18.21■□□□□ 0.51
LRRK2Q5S007 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 KRASP1-201ENST00000407852 552 ntBASIC18.21■□□□□ 0.51
LRRK2Q5S007 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRK2Q5S007 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRK2Q5S007 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 SLC25A3P1-201ENST00000443844 931 ntBASIC18.2■□□□□ 0.5
LRRK2Q5S007 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AC026396.1-201ENST00000419388 421 ntBASIC18.2■□□□□ 0.5
LRRK2Q5S007 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AC110285.5-201ENST00000611501 352 ntBASIC18.2■□□□□ 0.5
LRRK2Q5S007 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRK2Q5S007 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRK2Q5S007 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms