Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01554Q52M75 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01554Q52M75 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01554Q52M75 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01554Q52M75 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC10.4□□□□□ -0.75
LINC01554Q52M75 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01554Q52M75 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.4□□□□□ -0.75
LINC01554Q52M75 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
LINC01554Q52M75 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 AL157384.1-201ENST00000445995 2473 ntBASIC10.39□□□□□ -0.75
LINC01554Q52M75 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01554Q52M75 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC01554Q52M75 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 BID-212ENST00000614949 1988 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01554Q52M75 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC01554Q52M75 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ECEL1P2-201ENST00000461596 1295 ntBASIC10.37□□□□□ -0.75
LINC01554Q52M75 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms