Protein–RNA interactions for Protein: Q3ZCM7

TUBB8, Tubulin beta-8 chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8Q3ZCM7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 AL136162.1-201ENST00000607711 1078 ntBASIC21.3■■□□□ 1
TUBB8Q3ZCM7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 PCDHAC2-203ENST00000615316 3011 ntBASIC21.3■■□□□ 1
TUBB8Q3ZCM7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB8Q3ZCM7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 MIR935-201ENST00000401179 91 ntBASIC21.29■■□□□ 1
TUBB8Q3ZCM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TUBB8Q3ZCM7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 DUX4L19-201ENST00000557448 1267 ntBASIC21.28■■□□□ 1
TUBB8Q3ZCM7 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
TUBB8Q3ZCM7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 AC009102.2-201ENST00000606772 1639 ntBASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 AC135279.3-201ENST00000610945 1311 ntBASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB8Q3ZCM7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 AC004687.1-201ENST00000579003 1625 ntBASIC21.27■■□□□ 1
TUBB8Q3ZCM7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.27■■□□□ 1
TUBB8Q3ZCM7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB8Q3ZCM7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB8Q3ZCM7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB8Q3ZCM7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms