Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 KRT18P20-201ENST00000548986 1279 ntBASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 AL137784.2-201ENST00000607332 1000 ntBASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 AC120498.10-201ENST00000621827 505 ntBASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RASGEF1BQ0VAM2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RASGEF1BQ0VAM2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RASGEF1BQ0VAM2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.77■□□□□ 0.59
RASGEF1BQ0VAM2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RASGEF1BQ0VAM2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RASGEF1BQ0VAM2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 AF106564.1-201ENST00000607058 2553 ntBASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 AC006015.1-201ENST00000429970 570 ntBASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.75■□□□□ 0.59
RASGEF1BQ0VAM2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 AC061975.6-201ENST00000579045 1553 ntBASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 UBE2DNL-204ENST00000602536 740 ntBASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 AC092437.1-201ENST00000624794 1048 ntBASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RASGEF1BQ0VAM2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms