Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 RPL19BYBL027W 570 nt2.97□□□□□ -1.93
VPS38Q05919 IRC21YMR073C 606 nt2.97□□□□□ -1.93
VPS38Q05919 RPS16AYMR143W 432 nt2.97□□□□□ -1.93
VPS38Q05919 YNL043CYNL043C 321 nt2.97□□□□□ -1.93
VPS38Q05919 CSM4YPL200W 471 nt2.97□□□□□ -1.93
VPS38Q05919 DUF1YOL087C 3351 nt2.97□□□□□ -1.93
VPS38Q05919 PCK1YKR097W 1650 nt2.97□□□□□ -1.93
VPS38Q05919 YNL193WYNL193W 1677 nt2.97□□□□□ -1.93
VPS38Q05919 ARK1YNL020C 1917 nt2.97□□□□□ -1.93
VPS38Q05919 15S_rRNA15S_rRNA 1649 nt2.97□□□□□ -1.93
VPS38Q05919 RIX1YHR197W 2292 nt2.96□□□□□ -1.93
VPS38Q05919 YDR090CYDR090C 933 nt2.96□□□□□ -1.94
VPS38Q05919 ERP6YGL002W 651 nt2.96□□□□□ -1.94
VPS38Q05919 YGR017WYGR017W 894 nt2.96□□□□□ -1.94
VPS38Q05919 VMA21YGR105W 234 nt2.96□□□□□ -1.94
VPS38Q05919 COG2YGR120C 789 nt2.96□□□□□ -1.94
VPS38Q05919 MTM1YGR257C 1101 nt2.96□□□□□ -1.94
VPS38Q05919 YHR213WYHR213W 597 nt2.96□□□□□ -1.94
VPS38Q05919 CKA1YIL035C 1119 nt2.96□□□□□ -1.94
VPS38Q05919 YIR020C-BYIR020C-B 735 nt2.96□□□□□ -1.94
VPS38Q05919 YJR087WYJR087W 351 nt2.96□□□□□ -1.94
VPS38Q05919 SRP21YKL122C 504 nt2.96□□□□□ -1.94
VPS38Q05919 MCR1YKL150W 909 nt2.96□□□□□ -1.94
VPS38Q05919 CDC123YLR215C 1083 nt2.96□□□□□ -1.94
VPS38Q05919 YAR062WYAR062W 597 nt2.96□□□□□ -1.94
VPS38Q05919 YBR300CYBR300C 498 nt2.96□□□□□ -1.94
VPS38Q05919 YKL100CYKL100C 1764 nt2.96□□□□□ -1.94
VPS38Q05919 YAT2YER024W 2772 nt2.96□□□□□ -1.94
VPS38Q05919 YDR210W-BYDR210W-B 5313 nt2.96□□□□□ -1.94
VPS38Q05919 YDR261W-BYDR261W-B 5313 nt2.96□□□□□ -1.94
VPS38Q05919 YFL002W-AYFL002W-A 5313 nt2.96□□□□□ -1.94
VPS38Q05919 YGR161W-BYGR161W-B 5313 nt2.96□□□□□ -1.94
VPS38Q05919 YLR410W-BYLR410W-B 5313 nt2.96□□□□□ -1.94
VPS38Q05919 YCL019WYCL019W 5313 nt2.96□□□□□ -1.94
VPS38Q05919 TOM1YDR457W 9807 nt2.95□□□□□ -1.94
VPS38Q05919 KAP104YBR017C 2757 nt2.95□□□□□ -1.94
VPS38Q05919 TFB1YDR311W 1929 nt2.95□□□□□ -1.94
VPS38Q05919 TMA64YDR117C 1698 nt2.95□□□□□ -1.94
VPS38Q05919 SLP1YOR154W 1764 nt2.95□□□□□ -1.94
VPS38Q05919 VHR2YER064C 1518 nt2.95□□□□□ -1.94
VPS38Q05919 RTT10YPL183C 3042 nt2.95□□□□□ -1.94
VPS38Q05919 BIT61YJL058C 1632 nt2.95□□□□□ -1.94
VPS38Q05919 BMH2YDR099W 822 nt2.95□□□□□ -1.94
VPS38Q05919 TDA2YER071C 381 nt2.95□□□□□ -1.94
VPS38Q05919 YMR181CYMR181C 465 nt2.95□□□□□ -1.94
VPS38Q05919 MFB1YDR219C 1398 nt2.95□□□□□ -1.94
VPS38Q05919 YLR446WYLR446W 1302 nt2.94□□□□□ -1.94
VPS38Q05919 SCY1YGL083W 2415 nt2.94□□□□□ -1.94
VPS38Q05919 PUF6YDR496C 1971 nt2.94□□□□□ -1.94
VPS38Q05919 UTP15YMR093W 1542 nt2.94□□□□□ -1.94
VPS38Q05919 MET5YJR137C 4329 nt2.94□□□□□ -1.94
VPS38Q05919 snR9snR9 187 nt2.94□□□□□ -1.94
VPS38Q05919 YER091C-AYER091C-A 222 nt2.94□□□□□ -1.94
VPS38Q05919 YMR254CYMR254C 309 nt2.94□□□□□ -1.94
VPS38Q05919 YAP7YOL028C 738 nt2.94□□□□□ -1.94
VPS38Q05919 SSP1YHR184W 1716 nt2.93□□□□□ -1.94
VPS38Q05919 BCK1YJL095W 4437 nt2.93□□□□□ -1.94
VPS38Q05919 YGR053CYGR053C 852 nt2.93□□□□□ -1.94
VPS38Q05919 YIL012WYIL012W 342 nt2.93□□□□□ -1.94
VPS38Q05919 YJL086CYJL086C 369 nt2.93□□□□□ -1.94
VPS38Q05919 YJL119CYJL119C 324 nt2.93□□□□□ -1.94
VPS38Q05919 YKL023C-AYKL023C-A 228 nt2.93□□□□□ -1.94
VPS38Q05919 DAD2YKR083C 402 nt2.93□□□□□ -1.94
VPS38Q05919 CWC24YLR323C 780 nt2.93□□□□□ -1.94
VPS38Q05919 YBR085C-AYBR085C-A 258 nt2.93□□□□□ -1.94
VPS38Q05919 YGR027W-BYGR027W-B 5268 nt2.93□□□□□ -1.94
VPS38Q05919 YLR227W-BYLR227W-B 5268 nt2.93□□□□□ -1.94
VPS38Q05919 YPR158C-DYPR158C-D 5268 nt2.93□□□□□ -1.94
VPS38Q05919 YCK2YNL154C 1641 nt2.93□□□□□ -1.94
VPS38Q05919 SRO77YBL106C 3033 nt2.93□□□□□ -1.94
VPS38Q05919 RPN3YER021W 1572 nt2.92□□□□□ -1.94
VPS38Q05919 PDC2YDR081C 2778 nt2.92□□□□□ -1.94
VPS38Q05919 NCS2YNL119W 1482 nt2.92□□□□□ -1.94
VPS38Q05919 COX8YLR395C 237 nt2.92□□□□□ -1.94
VPS38Q05919 YML037CYML037C 1023 nt2.92□□□□□ -1.94
VPS38Q05919 ATP18YML081C-A 180 nt2.92□□□□□ -1.94
VPS38Q05919 RRT16YNL105W 429 nt2.92□□□□□ -1.94
VPS38Q05919 SFM1YOR021C 642 nt2.92□□□□□ -1.94
VPS38Q05919 PIS1YPR113W 663 nt2.92□□□□□ -1.94
VPS38Q05919 NEL1YHR035W 1893 nt2.92□□□□□ -1.94
VPS38Q05919 SWC4YGR002C 1431 nt2.92□□□□□ -1.94
VPS38Q05919 DBF20YPR111W 1695 nt2.92□□□□□ -1.94
VPS38Q05919 KAR9YPL269W 1935 nt2.91□□□□□ -1.94
VPS38Q05919 NAB3YPL190C 2409 nt2.91□□□□□ -1.94
VPS38Q05919 BOI1YBL085W 2943 nt2.91□□□□□ -1.94
VPS38Q05919 CAF120YNL278W 3183 nt2.91□□□□□ -1.94
VPS38Q05919 DSF2YBR007C 2211 nt2.91□□□□□ -1.94
VPS38Q05919 YCR090CYCR090C 549 nt2.91□□□□□ -1.94
VPS38Q05919 YDR115WYDR115W 318 nt2.91□□□□□ -1.94
VPS38Q05919 FRE2YKL220C 2136 nt2.91□□□□□ -1.94
VPS38Q05919 GMC2YLR445W 567 nt2.91□□□□□ -1.94
VPS38Q05919 YNL150WYNL150W 408 nt2.91□□□□□ -1.94
VPS38Q05919 PSK1YAL017W 4071 nt2.91□□□□□ -1.94
VPS38Q05919 SLH1YGR271W 5904 nt2.91□□□□□ -1.94
VPS38Q05919 TCB2YNL087W 3537 nt2.91□□□□□ -1.94
VPS38Q05919 YDR018CYDR018C 1191 nt2.9□□□□□ -1.95
VPS38Q05919 EMC4YGL231C 573 nt2.9□□□□□ -1.95
VPS38Q05919 YGR121W-AYGR121W-A 216 nt2.9□□□□□ -1.95
VPS38Q05919 CPR7YJR032W 1182 nt2.9□□□□□ -1.95
VPS38Q05919 ACF4YJR083C 930 nt2.9□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms