Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SKP1P63208 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SKP1P63208 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SKP1P63208 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SKP1P63208 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SKP1P63208 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SKP1P63208 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.69■□□□□ 0.74
SKP1P63208 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SKP1P63208 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.69■□□□□ 0.74
SKP1P63208 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.69■□□□□ 0.74
SKP1P63208 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.68■□□□□ 0.74
SKP1P63208 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.68■□□□□ 0.74
SKP1P63208 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.68■□□□□ 0.74
SKP1P63208 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.68■□□□□ 0.74
SKP1P63208 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SKP1P63208 RARRES2P11-201ENST00000635158 484 ntBASIC19.68■□□□□ 0.74
SKP1P63208 AC008694.1-202ENST00000636953 945 ntBASIC19.68■□□□□ 0.74
SKP1P63208 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.68■□□□□ 0.74
SKP1P63208 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SKP1P63208 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.68■□□□□ 0.74
SKP1P63208 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
SKP1P63208 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SKP1P63208 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SKP1P63208 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SKP1P63208 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.67■□□□□ 0.74
SKP1P63208 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SKP1P63208 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.67■□□□□ 0.74
SKP1P63208 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.67■□□□□ 0.74
SKP1P63208 AIRN-201ENST00000601203 4374 ntBASIC19.67■□□□□ 0.74
SKP1P63208 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SKP1P63208 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SKP1P63208 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SKP1P63208 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SKP1P63208 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.66■□□□□ 0.74
SKP1P63208 AC069236.1-201ENST00000604339 616 ntBASIC19.66■□□□□ 0.74
SKP1P63208 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SKP1P63208 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.66■□□□□ 0.74
SKP1P63208 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.66■□□□□ 0.74
SKP1P63208 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SKP1P63208 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SKP1P63208 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SKP1P63208 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 CDCA4P2-201ENST00000441182 718 ntBASIC19.65■□□□□ 0.74
SKP1P63208 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.65■□□□□ 0.74
SKP1P63208 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.65■□□□□ 0.74
SKP1P63208 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SKP1P63208 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SKP1P63208 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SKP1P63208 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SKP1P63208 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SKP1P63208 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SKP1P63208 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SKP1P63208 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SKP1P63208 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SKP1P63208 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SKP1P63208 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.64■□□□□ 0.73
SKP1P63208 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.64■□□□□ 0.73
SKP1P63208 CNN2P6-201ENST00000439038 900 ntBASIC19.64■□□□□ 0.73
SKP1P63208 AC006970.2-201ENST00000450065 779 ntBASIC19.64■□□□□ 0.73
SKP1P63208 AC005181.1-201ENST00000604782 1256 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms