Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM6P62312 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM6P62312 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LSM6P62312 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LSM6P62312 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 AC034268.1-201ENST00000441047 882 ntBASIC18.19■□□□□ 0.5
LSM6P62312 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.19■□□□□ 0.5
LSM6P62312 MIR6821-201ENST00000617625 74 ntBASIC18.19■□□□□ 0.5
LSM6P62312 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM6P62312 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LSM6P62312 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
LSM6P62312 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM6P62312 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM6P62312 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM6P62312 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LSM6P62312 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM6P62312 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM6P62312 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM6P62312 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.17■□□□□ 0.5
LSM6P62312 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LSM6P62312 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LSM6P62312 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.17■□□□□ 0.5
LSM6P62312 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.17■□□□□ 0.5
LSM6P62312 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 AC243732.1-201ENST00000612648 864 ntBASIC18.17■□□□□ 0.5
LSM6P62312 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM6P62312 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM6P62312 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM6P62312 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM6P62312 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LSM6P62312 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM6P62312 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LSM6P62312 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LSM6P62312 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.16■□□□□ 0.5
LSM6P62312 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.16■□□□□ 0.5
LSM6P62312 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM6P62312 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM6P62312 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM6P62312 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSM6P62312 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LSM6P62312 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM6P62312 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM6P62312 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.15■□□□□ 0.5
LSM6P62312 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms