Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS3AP61247 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RPS3AP61247 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS3AP61247 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS3AP61247 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RPS3AP61247 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.32■□□□□ 0.68
RPS3AP61247 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 AL162430.1-201ENST00000480705 870 ntBASIC19.32■□□□□ 0.68
RPS3AP61247 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS3AP61247 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS3AP61247 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS3AP61247 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS3AP61247 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS3AP61247 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.31■□□□□ 0.68
RPS3AP61247 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RPS3AP61247 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RPS3AP61247 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L2-201ENST00000561772 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
RPS3AP61247 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L6-201ENST00000626483 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L1-201ENST00000627662 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L8-201ENST00000629013 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L3-201ENST00000630187 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L7-201ENST00000630678 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 DUX4L5-201ENST00000630834 1275 ntBASIC19.31■□□□□ 0.68
RPS3AP61247 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS3AP61247 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RPS3AP61247 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.3■□□□□ 0.68
RPS3AP61247 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RPS3AP61247 LINC01006-201ENST00000333319 2292 ntBASIC19.3■□□□□ 0.68
RPS3AP61247 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS3AP61247 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS3AP61247 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPS3AP61247 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RPS3AP61247 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RPS3AP61247 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 AC104564.3-201ENST00000582367 638 ntBASIC19.3■□□□□ 0.68
RPS3AP61247 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RPS3AP61247 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPS3AP61247 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 AC005224.4-201ENST00000583262 1652 ntBASIC19.3■□□□□ 0.68
RPS3AP61247 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS3AP61247 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS3AP61247 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPS3AP61247 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.29■□□□□ 0.68
RPS3AP61247 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.29■□□□□ 0.68
RPS3AP61247 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.29■□□□□ 0.68
RPS3AP61247 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPS3AP61247 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.29■□□□□ 0.68
RPS3AP61247 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS3AP61247 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS3AP61247 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPS3AP61247 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS3AP61247 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.28■□□□□ 0.68
RPS3AP61247 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS3AP61247 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms