Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CXCR4P61073 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CXCR4P61073 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
CXCR4P61073 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.87■□□□□ 0.61
CXCR4P61073 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CXCR4P61073 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 AC010525.1-201ENST00000585559 441 ntBASIC18.87■□□□□ 0.61
CXCR4P61073 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.87■□□□□ 0.61
CXCR4P61073 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXCR4P61073 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CXCR4P61073 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.86■□□□□ 0.61
CXCR4P61073 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.86■□□□□ 0.61
CXCR4P61073 AL035685.1-201ENST00000636663 812 ntBASIC18.86■□□□□ 0.61
CXCR4P61073 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCR4P61073 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CXCR4P61073 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.86■□□□□ 0.61
CXCR4P61073 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CXCR4P61073 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCR4P61073 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CXCR4P61073 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
CXCR4P61073 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCR4P61073 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.85■□□□□ 0.61
CXCR4P61073 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.85■□□□□ 0.61
CXCR4P61073 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CXCR4P61073 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCR4P61073 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CXCR4P61073 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CXCR4P61073 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCR4P61073 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CXCR4P61073 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CXCR4P61073 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CXCR4P61073 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
CXCR4P61073 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CXCR4P61073 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CXCR4P61073 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CXCR4P61073 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 AP006587.3-201ENST00000525742 1516 ntBASIC18.84■□□□□ 0.61
CXCR4P61073 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCR4P61073 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCR4P61073 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.83■□□□□ 0.61
CXCR4P61073 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
CXCR4P61073 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CXCR4P61073 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCR4P61073 AC098818.2-201ENST00000564925 2320 ntBASIC18.83■□□□□ 0.61
CXCR4P61073 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCR4P61073 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCR4P61073 GUSBP5-201ENST00000418136 578 ntBASIC18.83■□□□□ 0.6
CXCR4P61073 FP700111.2-201ENST00000619190 1892 ntBASIC18.83■□□□□ 0.6
CXCR4P61073 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCR4P61073 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CXCR4P61073 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCR4P61073 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCR4P61073 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms