Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SRP54P61011 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP54P61011 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP54P61011 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP54P61011 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SRP54P61011 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP54P61011 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.44■□□□□ 0.86
SRP54P61011 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 TSPY20P-201ENST00000450910 630 ntBASIC20.44■□□□□ 0.86
SRP54P61011 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.44■□□□□ 0.86
SRP54P61011 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.44■□□□□ 0.86
SRP54P61011 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SRP54P61011 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.44■□□□□ 0.86
SRP54P61011 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SRP54P61011 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP54P61011 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP54P61011 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SRP54P61011 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
SRP54P61011 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP54P61011 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.43■□□□□ 0.86
SRP54P61011 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SRP54P61011 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.43■□□□□ 0.86
SRP54P61011 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP54P61011 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRP54P61011 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SRP54P61011 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.42■□□□□ 0.86
SRP54P61011 AC097658.1-201ENST00000475555 843 ntBASIC20.42■□□□□ 0.86
SRP54P61011 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.42■□□□□ 0.86
SRP54P61011 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.42■□□□□ 0.86
SRP54P61011 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.42■□□□□ 0.86
SRP54P61011 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SRP54P61011 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRP54P61011 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.41■□□□□ 0.86
SRP54P61011 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.41■□□□□ 0.86
SRP54P61011 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.41■□□□□ 0.86
SRP54P61011 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP54P61011 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SRP54P61011 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SRP54P61011 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 LSM12P1-201ENST00000411836 588 ntBASIC20.4■□□□□ 0.86
SRP54P61011 AC007322.3-201ENST00000426526 701 ntBASIC20.4■□□□□ 0.86
SRP54P61011 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
SRP54P61011 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.4■□□□□ 0.86
SRP54P61011 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.4■□□□□ 0.86
SRP54P61011 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.4■□□□□ 0.86
SRP54P61011 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.4■□□□□ 0.86
SRP54P61011 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.4■□□□□ 0.86
SRP54P61011 MIR4651-201ENST00000582622 73 ntBASIC20.4■□□□□ 0.86
SRP54P61011 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP54P61011 AC100791.3-201ENST00000617619 330 ntBASIC20.4■□□□□ 0.86
SRP54P61011 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.4■□□□□ 0.86
SRP54P61011 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms