Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.99■□□□□ 0.47
CLDN12P56749 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN12P56749 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN12P56749 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.99■□□□□ 0.47
CLDN12P56749 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN12P56749 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLDN12P56749 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN12P56749 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.99■□□□□ 0.47
CLDN12P56749 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CLDN12P56749 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN12P56749 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN12P56749 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 AC092171.4-201ENST00000609130 632 ntBASIC17.98■□□□□ 0.47
CLDN12P56749 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN12P56749 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN12P56749 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLDN12P56749 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN12P56749 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN12P56749 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN12P56749 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN12P56749 SLC47A1P1-202ENST00000449666 945 ntBASIC17.97■□□□□ 0.47
CLDN12P56749 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN12P56749 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN12P56749 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLDN12P56749 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN12P56749 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN12P56749 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN12P56749 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CLDN12P56749 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN12P56749 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN12P56749 AP005435.1-201ENST00000529293 1178 ntBASIC17.96■□□□□ 0.47
CLDN12P56749 MIR3621-201ENST00000580529 85 ntBASIC17.96■□□□□ 0.47
CLDN12P56749 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN12P56749 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN12P56749 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN12P56749 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN12P56749 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN12P56749 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLDN12P56749 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN12P56749 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN12P56749 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN12P56749 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 SERBP1P1-201ENST00000396021 1160 ntBASIC17.95■□□□□ 0.46
CLDN12P56749 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN12P56749 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN12P56749 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLDN12P56749 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN12P56749 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN12P56749 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms