Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN6P56747 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.95■□□□□ 0.78
CLDN6P56747 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLDN6P56747 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 MCRIP2P1-201ENST00000394346 511 ntBASIC19.95■□□□□ 0.78
CLDN6P56747 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN6P56747 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN6P56747 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.95■□□□□ 0.78
CLDN6P56747 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN6P56747 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN6P56747 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLDN6P56747 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLDN6P56747 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDN6P56747 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN6P56747 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN6P56747 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CLDN6P56747 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
CLDN6P56747 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN6P56747 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 KRT18P68-201ENST00000392293 1000 ntBASIC19.94■□□□□ 0.78
CLDN6P56747 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.94■□□□□ 0.78
CLDN6P56747 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLDN6P56747 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
CLDN6P56747 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
CLDN6P56747 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CLDN6P56747 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN6P56747 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN6P56747 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
CLDN6P56747 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.93■□□□□ 0.78
CLDN6P56747 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 TSPY7P-201ENST00000431358 1114 ntBASIC19.93■□□□□ 0.78
CLDN6P56747 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.93■□□□□ 0.78
CLDN6P56747 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.93■□□□□ 0.78
CLDN6P56747 AC100791.3-201ENST00000617619 330 ntBASIC19.93■□□□□ 0.78
CLDN6P56747 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN6P56747 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN6P56747 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CLDN6P56747 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN6P56747 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN6P56747 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.93■□□□□ 0.78
CLDN6P56747 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CLDN6P56747 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN6P56747 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN6P56747 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN6P56747 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 AC010542.4-201ENST00000563151 1910 ntBASIC19.92■□□□□ 0.78
CLDN6P56747 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN6P56747 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CLDN6P56747 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN6P56747 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN6P56747 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN6P56747 TSPY15P-201ENST00000457163 923 ntBASIC19.91■□□□□ 0.78
CLDN6P56747 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN6P56747 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN6P56747 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN6P56747 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN6P56747 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN6P56747 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN6P56747 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms