Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.46■□□□□ 0.07
CMC4P56277 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CMC4P56277 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CMC4P56277 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CMC4P56277 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.46■□□□□ 0.06
CMC4P56277 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CMC4P56277 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CMC4P56277 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.46■□□□□ 0.06
CMC4P56277 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CMC4P56277 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CMC4P56277 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.45■□□□□ 0.06
CMC4P56277 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CMC4P56277 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.45■□□□□ 0.06
CMC4P56277 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.45■□□□□ 0.06
CMC4P56277 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.45■□□□□ 0.06
CMC4P56277 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.45■□□□□ 0.06
CMC4P56277 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.45■□□□□ 0.06
CMC4P56277 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
CMC4P56277 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.45■□□□□ 0.06
CMC4P56277 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.45■□□□□ 0.06
CMC4P56277 AC092437.1-201ENST00000624794 1048 ntBASIC15.45■□□□□ 0.06
CMC4P56277 RARRES2P11-201ENST00000635158 484 ntBASIC15.45■□□□□ 0.06
CMC4P56277 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CMC4P56277 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.45■□□□□ 0.06
CMC4P56277 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CMC4P56277 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.44■□□□□ 0.06
CMC4P56277 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.44■□□□□ 0.06
CMC4P56277 AC116050.2-201ENST00000612102 1779 ntBASIC15.44■□□□□ 0.06
CMC4P56277 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CMC4P56277 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 AC007322.3-201ENST00000426526 701 ntBASIC15.44■□□□□ 0.06
CMC4P56277 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.44■□□□□ 0.06
CMC4P56277 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.44■□□□□ 0.06
CMC4P56277 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 FAM21FP-204ENST00000608637 956 ntBASIC15.44■□□□□ 0.06
CMC4P56277 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CMC4P56277 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CMC4P56277 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CMC4P56277 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.43■□□□□ 0.06
CMC4P56277 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.43■□□□□ 0.06
CMC4P56277 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CMC4P56277 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.43■□□□□ 0.06
CMC4P56277 OR10C1-204ENST00000622521 1039 ntBASIC15.43■□□□□ 0.06
CMC4P56277 AC073111.5-205ENST00000641717 521 ntBASIC15.43■□□□□ 0.06
CMC4P56277 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.43■□□□□ 0.06
CMC4P56277 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CMC4P56277 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CMC4P56277 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.42■□□□□ 0.06
CMC4P56277 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CMC4P56277 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CMC4P56277 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.42■□□□□ 0.06
CMC4P56277 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 PGM5P4-201ENST00000421970 445 ntBASIC15.42■□□□□ 0.06
CMC4P56277 AC091799.1-201ENST00000422823 811 ntBASIC15.42■□□□□ 0.06
CMC4P56277 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CMC4P56277 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.42■□□□□ 0.06
CMC4P56277 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CMC4P56277 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.42■□□□□ 0.06
CMC4P56277 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CMC4P56277 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms