Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATP1B3P54709 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP1B3P54709 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.93■□□□□ 0.46
ATP1B3P54709 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP1B3P54709 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
ATP1B3P54709 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP1B3P54709 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP1B3P54709 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP1B3P54709 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP1B3P54709 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP1B3P54709 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP1B3P54709 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP1B3P54709 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.92■□□□□ 0.46
ATP1B3P54709 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP1B3P54709 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.92■□□□□ 0.46
ATP1B3P54709 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ATP1B3P54709 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP1B3P54709 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ATP1B3P54709 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP1B3P54709 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.91■□□□□ 0.46
ATP1B3P54709 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP1B3P54709 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.91■□□□□ 0.46
ATP1B3P54709 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP1B3P54709 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP1B3P54709 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP1B3P54709 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP1B3P54709 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
ATP1B3P54709 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP1B3P54709 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP1B3P54709 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP1B3P54709 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ATP1B3P54709 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP1B3P54709 AC012414.1-201ENST00000556676 535 ntBASIC17.9■□□□□ 0.46
ATP1B3P54709 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP1B3P54709 AL139246.5-201ENST00000606645 996 ntBASIC17.9■□□□□ 0.46
ATP1B3P54709 AL031432.3-201ENST00000607698 485 ntBASIC17.9■□□□□ 0.46
ATP1B3P54709 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP1B3P54709 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP1B3P54709 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP1B3P54709 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
ATP1B3P54709 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP1B3P54709 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ATP1B3P54709 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP1B3P54709 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP1B3P54709 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATP1B3P54709 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 AL354811.1-201ENST00000610286 706 ntBASIC17.89■□□□□ 0.45
ATP1B3P54709 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP1B3P54709 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ATP1B3P54709 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP1B3P54709 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP1B3P54709 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms