Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 IRC8YJL051W 2469 nt2.4□□□□□ -2.03
YNL040WP53960 PIG2YIL045W 1617 nt2.39□□□□□ -2.03
YNL040WP53960 EMI1YDR512C 564 nt2.39□□□□□ -2.03
YNL040WP53960 HLR1YDR528W 1272 nt2.39□□□□□ -2.03
YNL040WP53960 MIG2YGL209W 1149 nt2.39□□□□□ -2.03
YNL040WP53960 YGL230CYGL230C 444 nt2.39□□□□□ -2.03
YNL040WP53960 SFT1YKL006C-A 294 nt2.39□□□□□ -2.03
YNL040WP53960 AIM36YMR157C 768 nt2.39□□□□□ -2.03
YNL040WP53960 YOL106WYOL106W 354 nt2.39□□□□□ -2.03
YNL040WP53960 AEP1YMR064W 1557 nt2.39□□□□□ -2.03
YNL040WP53960 GEA1YJR031C 4227 nt2.39□□□□□ -2.03
YNL040WP53960 SMC6YLR383W 3345 nt2.39□□□□□ -2.03
YNL040WP53960 UTP5YDR398W 1932 nt2.38□□□□□ -2.03
YNL040WP53960 SIR3YLR442C 2937 nt2.38□□□□□ -2.03
YNL040WP53960 PSD2YGR170W 3417 nt2.38□□□□□ -2.03
YNL040WP53960 CBS2YDR197W 1170 nt2.38□□□□□ -2.03
YNL040WP53960 GTR2YGR163W 1026 nt2.38□□□□□ -2.03
YNL040WP53960 BAT1YHR208W 1182 nt2.38□□□□□ -2.03
YNL040WP53960 SEC28YIL076W 891 nt2.38□□□□□ -2.03
YNL040WP53960 YJL032WYJL032W 315 nt2.38□□□□□ -2.03
YNL040WP53960 ASG7YJL170C 630 nt2.38□□□□□ -2.03
YNL040WP53960 TOR1YJR066W 7413 nt2.38□□□□□ -2.03
YNL040WP53960 YNL089CYNL089C 477 nt2.38□□□□□ -2.03
YNL040WP53960 YOL107WYOL107W 1029 nt2.38□□□□□ -2.03
YNL040WP53960 RFC5YBR087W 1065 nt2.38□□□□□ -2.03
YNL040WP53960 JJJ2YJL162C 1752 nt2.38□□□□□ -2.03
YNL040WP53960 ARK1YNL020C 1917 nt2.37□□□□□ -2.03
YNL040WP53960 HTB1YDR224C 396 nt2.37□□□□□ -2.03
YNL040WP53960 YFL015CYFL015C 495 nt2.37□□□□□ -2.03
YNL040WP53960 VEL1YGL258W 621 nt2.37□□□□□ -2.03
YNL040WP53960 YHL006W-AYHL006W-A 354 nt2.37□□□□□ -2.03
YNL040WP53960 GPX1YKL026C 504 nt2.37□□□□□ -2.03
YNL040WP53960 YLR307C-AYLR307C-A 264 nt2.37□□□□□ -2.03
YNL040WP53960 FAR3YMR052W 615 nt2.37□□□□□ -2.03
YNL040WP53960 YOL057WYOL057W 2136 nt2.37□□□□□ -2.03
YNL040WP53960 BTS1YPL069C 1008 nt2.37□□□□□ -2.03
YNL040WP53960 YPL142CYPL142C 318 nt2.37□□□□□ -2.03
YNL040WP53960 ALG14YBR070C 714 nt2.37□□□□□ -2.03
YNL040WP53960 CWC22YGR278W 1734 nt2.37□□□□□ -2.03
YNL040WP53960 SEN54YPL083C 1404 nt2.36□□□□□ -2.03
YNL040WP53960 RSM24YDR175C 960 nt2.36□□□□□ -2.03
YNL040WP53960 YHL002C-AYHL002C-A 489 nt2.36□□□□□ -2.03
YNL040WP53960 YHL048C-AYHL048C-A 135 nt2.36□□□□□ -2.03
YNL040WP53960 IKI1YHR187W 930 nt2.36□□□□□ -2.03
YNL040WP53960 CTK2YJL006C 972 nt2.36□□□□□ -2.03
YNL040WP53960 YJL047C-AYJL047C-A 135 nt2.36□□□□□ -2.03
YNL040WP53960 RPL17BYJL177W 555 nt2.36□□□□□ -2.03
YNL040WP53960 HUA2YOR284W 732 nt2.36□□□□□ -2.03
YNL040WP53960 MRPL40YPL173W 894 nt2.36□□□□□ -2.03
YNL040WP53960 ACM1YPL267W 630 nt2.36□□□□□ -2.03
YNL040WP53960 TMA64YDR117C 1698 nt2.36□□□□□ -2.03
YNL040WP53960 APL5YPL195W 2799 nt2.36□□□□□ -2.03
YNL040WP53960 SAG1YJR004C 1953 nt2.36□□□□□ -2.03
YNL040WP53960 DUG2YBR281C 2637 nt2.36□□□□□ -2.03
YNL040WP53960 YBL005W-BYBL005W-B 5268 nt2.35□□□□□ -2.03
YNL040WP53960 ATC1YDR184C 885 nt2.35□□□□□ -2.03
YNL040WP53960 AAD16YFL057C 459 nt2.35□□□□□ -2.03
YNL040WP53960 SUI2YJR007W 915 nt2.35□□□□□ -2.03
YNL040WP53960 LIP2YLR239C 987 nt2.35□□□□□ -2.03
YNL040WP53960 RPS30AYLR287C-A 192 nt2.35□□□□□ -2.03
YNL040WP53960 YMR181CYMR181C 465 nt2.35□□□□□ -2.03
YNL040WP53960 DYN3YMR299C 939 nt2.35□□□□□ -2.03
YNL040WP53960 SPR2YOR214C 711 nt2.35□□□□□ -2.03
YNL040WP53960 MGE1YOR232W 687 nt2.35□□□□□ -2.03
YNL040WP53960 RPC40YPR110C 1008 nt2.35□□□□□ -2.03
YNL040WP53960 TPS2YDR074W 2691 nt2.35□□□□□ -2.03
YNL040WP53960 YPK1YKL126W 2043 nt2.35□□□□□ -2.03
YNL040WP53960 DBF20YPR111W 1695 nt2.34□□□□□ -2.03
YNL040WP53960 FUS2YMR232W 2034 nt2.34□□□□□ -2.03
YNL040WP53960 GOS1YHL031C 672 nt2.34□□□□□ -2.03
YNL040WP53960 UBC12YLR306W 567 nt2.34□□□□□ -2.03
YNL040WP53960 YBL068W-AYBL068W-A 237 nt2.34□□□□□ -2.03
YNL040WP53960 NGL1YOL042W 1092 nt2.34□□□□□ -2.03
YNL040WP53960 DAD3YBR233W-A 285 nt2.34□□□□□ -2.03
YNL040WP53960 ESA1YOR244W 1338 nt2.34□□□□□ -2.04
YNL040WP53960 VHR1YIL056W 1923 nt2.34□□□□□ -2.04
YNL040WP53960 SRB4YER022W 2064 nt2.33□□□□□ -2.04
YNL040WP53960 TFC3YAL001C 3483 nt2.33□□□□□ -2.04
YNL040WP53960 ERT1YBR239C 1590 nt2.33□□□□□ -2.04
YNL040WP53960 RSM27YGR215W 333 nt2.33□□□□□ -2.04
YNL040WP53960 YIL046W-AYIL046W-A 165 nt2.33□□□□□ -2.04
YNL040WP53960 IPP1YBR011C 864 nt2.33□□□□□ -2.04
YNL040WP53960 ISU1YPL135W 498 nt2.33□□□□□ -2.04
YNL040WP53960 CIN2YPL241C 807 nt2.33□□□□□ -2.04
YNL040WP53960 RRG8YPR116W 834 nt2.33□□□□□ -2.04
YNL040WP53960 CLN3YAL040C 1743 nt2.33□□□□□ -2.04
YNL040WP53960 INO80YGL150C 4470 nt2.33□□□□□ -2.04
YNL040WP53960 TRM2YKR056W 1920 nt2.32□□□□□ -2.04
YNL040WP53960 GCV2YMR189W 3105 nt2.32□□□□□ -2.04
YNL040WP53960 RIM13YMR154C 2184 nt2.32□□□□□ -2.04
YNL040WP53960 YFR016CYFR016C 3702 nt2.32□□□□□ -2.04
YNL040WP53960 RPL27BYDR471W 411 nt2.32□□□□□ -2.04
YNL040WP53960 YFR054CYFR054C 579 nt2.32□□□□□ -2.04
YNL040WP53960 ARC18YLR370C 537 nt2.32□□□□□ -2.04
YNL040WP53960 MRPL33YMR286W 261 nt2.32□□□□□ -2.04
YNL040WP53960 PEX27YOR193W 1131 nt2.32□□□□□ -2.04
YNL040WP53960 RRG7YOR305W 729 nt2.32□□□□□ -2.04
YNL040WP53960 snR24snR24 89 nt2.32□□□□□ -2.04
YNL040WP53960 SRP1YNL189W 1629 nt2.31□□□□□ -2.04
YNL040WP53960 SAP190YKR028W 3102 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms