Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 OCT1YKL134C 2319 nt4.24□□□□□ -1.73
NRD1P53617 KIN2YLR096W 3444 nt4.24□□□□□ -1.73
NRD1P53617 MNT4YNR059W 1743 nt4.24□□□□□ -1.73
NRD1P53617 RPS25AYGR027C 327 nt4.24□□□□□ -1.73
NRD1P53617 TVP18YMR071C 504 nt4.24□□□□□ -1.73 RIP-Chip
NRD1P53617 ATX1YNL259C 222 nt4.24□□□□□ -1.73 RIP-Chip
NRD1P53617 APP1YNL094W 1764 nt4.24□□□□□ -1.73
NRD1P53617 MCM4YPR019W 2802 nt4.24□□□□□ -1.73
NRD1P53617 GYP6YJL044C 1377 nt4.24□□□□□ -1.73
NRD1P53617 TRM2YKR056W 1920 nt4.23□□□□□ -1.73
NRD1P53617 TMA17YDL110C 453 nt4.23□□□□□ -1.73 RIP-Chip
NRD1P53617 YDL180WYDL180W 1644 nt4.23□□□□□ -1.73
NRD1P53617 MSK1YNL073W 1731 nt4.23□□□□□ -1.73
NRD1P53617 EGT2YNL327W 3126 nt4.23□□□□□ -1.73 RIP-Chip
NRD1P53617 GAL4YPL248C 2646 nt4.23□□□□□ -1.73
NRD1P53617 OLE1YGL055W 1533 nt4.22□□□□□ -1.73
NRD1P53617 CDC6YJL194W 1542 nt4.22□□□□□ -1.73
NRD1P53617 snR59snR59 78 nt4.22□□□□□ -1.73
NRD1P53617 THI13YDL244W 1023 nt4.22□□□□□ -1.73
NRD1P53617 YDR371C-AYDR371C-A 105 nt4.22□□□□□ -1.73
NRD1P53617 SUI1YNL244C 327 nt4.22□□□□□ -1.73
NRD1P53617 YAR1YPL239W 603 nt4.22□□□□□ -1.73
NRD1P53617 VPS69YPR087W 321 nt4.22□□□□□ -1.73
NRD1P53617 CYM1YDR430C 2970 nt4.22□□□□□ -1.73
NRD1P53617 ROK1YGL171W 1695 nt4.22□□□□□ -1.73
NRD1P53617 GEM1YAL048C 1989 nt4.22□□□□□ -1.73
NRD1P53617 FLC1YPL221W 2382 nt4.21□□□□□ -1.73
NRD1P53617 KIC1YHR102W 3243 nt4.21□□□□□ -1.74 RIP-Chip
NRD1P53617 YDL228CYDL228C 642 nt4.21□□□□□ -1.74
NRD1P53617 YDR246W-AYDR246W-A 201 nt4.21□□□□□ -1.74
NRD1P53617 YGL165CYGL165C 579 nt4.21□□□□□ -1.74
NRD1P53617 RPS4BYHR203C 786 nt4.21□□□□□ -1.74
NRD1P53617 RSM25YIL093C 795 nt4.21□□□□□ -1.74 RIP-Chip
NRD1P53617 TIM8YJR135W-A 264 nt4.21□□□□□ -1.74
NRD1P53617 RPS4AYJR145C 786 nt4.21□□□□□ -1.74
NRD1P53617 IRC23YOR044W 474 nt4.21□□□□□ -1.74 RIP-Chip
NRD1P53617 PCK1YKR097W 1650 nt4.21□□□□□ -1.74
NRD1P53617 PEX8YGR077C 1770 nt4.21□□□□□ -1.74 RIP-Chip
NRD1P53617 HRK1YOR267C 2280 nt4.2□□□□□ -1.74
NRD1P53617 FRQ1YDR373W 573 nt4.2□□□□□ -1.74
NRD1P53617 tL(UAG)JtL(UAG)J 82 nt4.2□□□□□ -1.74
NRD1P53617 tL(UAG)L1tL(UAG)L1 82 nt4.2□□□□□ -1.74
NRD1P53617 tL(UAG)L2tL(UAG)L2 82 nt4.2□□□□□ -1.74
NRD1P53617 VPS55YJR044C 423 nt4.2□□□□□ -1.74 RIP-Chip
NRD1P53617 HTA2YBL003C 399 nt4.2□□□□□ -1.74
NRD1P53617 RPS17AYML024W 411 nt4.2□□□□□ -1.74
NRD1P53617 RIM9YMR063W 720 nt4.2□□□□□ -1.74
NRD1P53617 RPS16AYMR143W 432 nt4.2□□□□□ -1.74 RIP-Chip
NRD1P53617 SSB1YDL229W 1842 nt4.2□□□□□ -1.74
NRD1P53617 ECM25YJL201W 1800 nt4.2□□□□□ -1.74
NRD1P53617 TRM44YPL030W 1704 nt4.2□□□□□ -1.74
NRD1P53617 FMP25YLR077W 1752 nt4.19□□□□□ -1.74
NRD1P53617 SGO1YOR073W 1773 nt4.19□□□□□ -1.74 RIP-Chip
NRD1P53617 PEP5YMR231W 3090 nt4.19□□□□□ -1.74
NRD1P53617 CDC48YDL126C 2508 nt4.19□□□□□ -1.74
NRD1P53617 YDR537CYDR537C 606 nt4.19□□□□□ -1.74
NRD1P53617 PAU2YEL049W 363 nt4.19□□□□□ -1.74
NRD1P53617 YNL010WYNL010W 726 nt4.19□□□□□ -1.74 RIP-Chip
NRD1P53617 ALG11YNL048W 1647 nt4.19□□□□□ -1.74
NRD1P53617 YSW1YBR148W 1830 nt4.18□□□□□ -1.74
NRD1P53617 YOL153CYOL153C 1746 nt4.18□□□□□ -1.74
NRD1P53617 KCC4YCL024W 3114 nt4.18□□□□□ -1.74
NRD1P53617 PMP2YEL017C-A 132 nt4.18□□□□□ -1.74 RIP-Chip
NRD1P53617 PAI3YMR174C 207 nt4.18□□□□□ -1.74 RIP-Chip
NRD1P53617 TRM112YNR046W 408 nt4.18□□□□□ -1.74 RIP-Chip
NRD1P53617 YPL025CYPL025C 558 nt4.18□□□□□ -1.74
NRD1P53617 TSC3YBR058C-A 243 nt4.18□□□□□ -1.74
NRD1P53617 POF1YCL047C 777 nt4.18□□□□□ -1.74
NRD1P53617 ABF1YKL112W 2196 nt4.18□□□□□ -1.74
NRD1P53617 RRI2YOL117W 1938 nt4.18□□□□□ -1.74
NRD1P53617 PRM7YDL039C 2097 nt4.18□□□□□ -1.74
NRD1P53617 SHE4YOR035C 2370 nt4.18□□□□□ -1.74
NRD1P53617 SPC105YGL093W 2754 nt4.18□□□□□ -1.74
NRD1P53617 SKN7YHR206W 1869 nt4.18□□□□□ -1.74
NRD1P53617 ATP25YMR098C 1839 nt4.17□□□□□ -1.74
NRD1P53617 STE14YDR410C 720 nt4.17□□□□□ -1.74 RIP-Chip
NRD1P53617 OTU1YFL044C 906 nt4.17□□□□□ -1.74 RIP-Chip
NRD1P53617 TAR1YLR154W-C 375 nt4.17□□□□□ -1.74
NRD1P53617 YBL073WYBL073W 312 nt4.17□□□□□ -1.74
NRD1P53617 YOR381W-AYOR381W-A 168 nt4.17□□□□□ -1.74
NRD1P53617 YDR261C-DYDR261C-D 4815 nt4.17□□□□□ -1.74
NRD1P53617 EXO70YJL085W 1872 nt4.17□□□□□ -1.74
NRD1P53617 SKG6YHR149C 2205 nt4.16□□□□□ -1.74
NRD1P53617 OLI1Q0130 231 nt4.16□□□□□ -1.74 RIP-Chip
NRD1P53617 YLL066W-BYLL066W-B 171 nt4.16□□□□□ -1.74
NRD1P53617 RPL15AYLR029C 615 nt4.16□□□□□ -1.74
NRD1P53617 YML116W-AYML116W-A 303 nt4.16□□□□□ -1.74
NRD1P53617 YNL067W-BYNL067W-B 141 nt4.16□□□□□ -1.74
NRD1P53617 TRM7YBR061C 933 nt4.16□□□□□ -1.74
NRD1P53617 CEP3YMR168C 1827 nt4.16□□□□□ -1.74 RIP-Chip
NRD1P53617 SEC2YNL272C 2280 nt4.15□□□□□ -1.74
NRD1P53617 YHL026CYHL026C 948 nt4.15□□□□□ -1.75
NRD1P53617 YHL041WYHL041W 450 nt4.15□□□□□ -1.75
NRD1P53617 YHR139C-AYHR139C-A 312 nt4.15□□□□□ -1.75
NRD1P53617 PMC1YGL006W 3522 nt4.15□□□□□ -1.75
NRD1P53617 PHO2YDL106C 1680 nt4.15□□□□□ -1.75
NRD1P53617 TPO5YKL174C 1857 nt4.15□□□□□ -1.75
NRD1P53617 BI4Q0120 1917 nt4.15□□□□□ -1.75
NRD1P53617 LST4YKL176C 2487 nt4.14□□□□□ -1.75
NRD1P53617 RPL29YFR032C-A 180 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 49.9 ms