Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RNF144AP50876 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF144AP50876 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF144AP50876 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF144AP50876 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF144AP50876 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF144AP50876 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF144AP50876 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF144AP50876 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RNF144AP50876 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF144AP50876 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF144AP50876 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 AP001160.3-201ENST00000601484 763 ntBASIC19.21■□□□□ 0.67
RNF144AP50876 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNF144AP50876 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
RNF144AP50876 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF144AP50876 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF144AP50876 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF144AP50876 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF144AP50876 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 AC097381.1-201ENST00000429019 1296 ntBASIC19.2■□□□□ 0.66
RNF144AP50876 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF144AP50876 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF144AP50876 RARRES2P6-201ENST00000567333 442 ntBASIC19.2■□□□□ 0.66
RNF144AP50876 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF144AP50876 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF144AP50876 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF144AP50876 PLK5-205ENST00000642079 1969 ntBASIC19.2■□□□□ 0.66
RNF144AP50876 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF144AP50876 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF144AP50876 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF144AP50876 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF144AP50876 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF144AP50876 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF144AP50876 AC026271.2-201ENST00000428091 497 ntBASIC19.19■□□□□ 0.66
RNF144AP50876 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF144AP50876 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF144AP50876 AC010141.2-201ENST00000452426 721 ntBASIC19.18■□□□□ 0.66
RNF144AP50876 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF144AP50876 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF144AP50876 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF144AP50876 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF144AP50876 MIR6821-201ENST00000617625 74 ntBASIC19.18■□□□□ 0.66
RNF144AP50876 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF144AP50876 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF144AP50876 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF144AP50876 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF144AP50876 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF144AP50876 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF144AP50876 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF144AP50876 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF144AP50876 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
RNF144AP50876 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF144AP50876 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms