Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPAP49450 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPAP49450 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CENPAP49450 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CENPAP49450 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CENPAP49450 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CENPAP49450 BX005040.4-201ENST00000637145 1518 ntBASIC18.7■□□□□ 0.58
CENPAP49450 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.7■□□□□ 0.58
CENPAP49450 MIR939-201ENST00000401314 82 ntBASIC18.7■□□□□ 0.58
CENPAP49450 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 AC091305.1-201ENST00000479476 895 ntBASIC18.7■□□□□ 0.58
CENPAP49450 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPAP49450 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPAP49450 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPAP49450 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CENPAP49450 MIR572-201ENST00000384983 95 ntBASIC18.69■□□□□ 0.58
CENPAP49450 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPAP49450 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.69■□□□□ 0.58
CENPAP49450 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.69■□□□□ 0.58
CENPAP49450 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPAP49450 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CENPAP49450 AC005224.4-201ENST00000583262 1652 ntBASIC18.69■□□□□ 0.58
CENPAP49450 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CENPAP49450 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPAP49450 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPAP49450 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CENPAP49450 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.68■□□□□ 0.58
CENPAP49450 AL136967.2-201ENST00000623968 743 ntBASIC18.68■□□□□ 0.58
CENPAP49450 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CENPAP49450 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPAP49450 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CENPAP49450 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPAP49450 AL139246.5-201ENST00000606645 996 ntBASIC18.67■□□□□ 0.58
CENPAP49450 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.67■□□□□ 0.58
CENPAP49450 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.67■□□□□ 0.58
CENPAP49450 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CENPAP49450 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CENPAP49450 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPAP49450 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPAP49450 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPAP49450 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPAP49450 AC142381.2-201ENST00000566120 298 ntBASIC18.66■□□□□ 0.58
CENPAP49450 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms