Protein–RNA interactions for Protein: P47180

PGU1, Polygalacturonase, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGU1P47180 tW(CCA)G1tW(CCA)G1 72 nt2.4□□□□□ -2.03
PGU1P47180 tW(CCA)G2tW(CCA)G2 72 nt2.4□□□□□ -2.03
PGU1P47180 tW(CCA)JtW(CCA)J 72 nt2.4□□□□□ -2.03
PGU1P47180 tW(CCA)KtW(CCA)K 72 nt2.4□□□□□ -2.03
PGU1P47180 tW(CCA)MtW(CCA)M 72 nt2.4□□□□□ -2.03
PGU1P47180 tW(CCA)PtW(CCA)P 72 nt2.4□□□□□ -2.03
PGU1P47180 IST3YIR005W 447 nt2.4□□□□□ -2.03
PGU1P47180 YJR087WYJR087W 351 nt2.4□□□□□ -2.03
PGU1P47180 YET1YKL065C 621 nt2.4□□□□□ -2.03
PGU1P47180 YAR069CYAR069C 294 nt2.4□□□□□ -2.03
PGU1P47180 VPS20YMR077C 666 nt2.4□□□□□ -2.03
PGU1P47180 RSM19YNR037C 276 nt2.4□□□□□ -2.03
PGU1P47180 YPR172WYPR172W 603 nt2.4□□□□□ -2.03
PGU1P47180 TRS20YBR254C 528 nt2.4□□□□□ -2.03
PGU1P47180 BRE5YNR051C 1548 nt2.4□□□□□ -2.03
PGU1P47180 FAR1YJL157C 2493 nt2.4□□□□□ -2.03
PGU1P47180 MNT3YIL014W 1893 nt2.39□□□□□ -2.03
PGU1P47180 TOM70YNL121C 1854 nt2.39□□□□□ -2.03
PGU1P47180 RCY1YJL204C 2523 nt2.39□□□□□ -2.03
PGU1P47180 JJJ2YJL162C 1752 nt2.39□□□□□ -2.03
PGU1P47180 SIN3YOL004W 4611 nt2.39□□□□□ -2.03
PGU1P47180 SRD1YCR018C 666 nt2.39□□□□□ -2.03
PGU1P47180 CRD1YDL142C 852 nt2.39□□□□□ -2.03
PGU1P47180 YDR250CYDR250C 276 nt2.39□□□□□ -2.03
PGU1P47180 PCL5YHR071W 690 nt2.39□□□□□ -2.03
PGU1P47180 YJL169WYJL169W 369 nt2.39□□□□□ -2.03
PGU1P47180 PHD1YKL043W 1101 nt2.39□□□□□ -2.03
PGU1P47180 ENV10YLR065C 546 nt2.39□□□□□ -2.03
PGU1P47180 IRC21YMR073C 606 nt2.39□□□□□ -2.03
PGU1P47180 YMR187CYMR187C 1296 nt2.39□□□□□ -2.03
PGU1P47180 YNL109WYNL109W 546 nt2.39□□□□□ -2.03
PGU1P47180 YNL150WYNL150W 408 nt2.39□□□□□ -2.03
PGU1P47180 YNL235CYNL235C 432 nt2.39□□□□□ -2.03
PGU1P47180 YBR062CYBR062C 543 nt2.39□□□□□ -2.03
PGU1P47180 JID1YPR061C 906 nt2.39□□□□□ -2.03
PGU1P47180 TFC4YGR047C 3078 nt2.39□□□□□ -2.03
PGU1P47180 RPN3YER021W 1572 nt2.39□□□□□ -2.03
PGU1P47180 YDR210W-AYDR210W-A 1317 nt2.39□□□□□ -2.03
PGU1P47180 NOP12YOL041C 1380 nt2.38□□□□□ -2.03
PGU1P47180 SHS1YDL225W 1656 nt2.38□□□□□ -2.03
PGU1P47180 SPP382YLR424W 2127 nt2.38□□□□□ -2.03
PGU1P47180 snR70snR70 164 nt2.38□□□□□ -2.03
PGU1P47180 YDL163WYDL163W 303 nt2.38□□□□□ -2.03
PGU1P47180 YDR220CYDR220C 294 nt2.38□□□□□ -2.03
PGU1P47180 ASG7YJL170C 630 nt2.38□□□□□ -2.03
PGU1P47180 YLR456WYLR456W 615 nt2.38□□□□□ -2.03
PGU1P47180 ATP18YML081C-A 180 nt2.38□□□□□ -2.03
PGU1P47180 ATX1YNL259C 222 nt2.38□□□□□ -2.03
PGU1P47180 CSI2YOL007C 1026 nt2.38□□□□□ -2.03
PGU1P47180 YPR170CYPR170C 336 nt2.38□□□□□ -2.03
PGU1P47180 BCK1YJL095W 4437 nt2.38□□□□□ -2.03
PGU1P47180 YGR067CYGR067C 2415 nt2.38□□□□□ -2.03
PGU1P47180 YJL132WYJL132W 2253 nt2.38□□□□□ -2.03
PGU1P47180 KHA1YJL094C 2622 nt2.38□□□□□ -2.03
PGU1P47180 DUF1YOL087C 3351 nt2.37□□□□□ -2.03
PGU1P47180 AYT1YLL063C 1425 nt2.37□□□□□ -2.03
PGU1P47180 YDR210W-BYDR210W-B 5313 nt2.37□□□□□ -2.03
PGU1P47180 YDR261W-BYDR261W-B 5313 nt2.37□□□□□ -2.03
PGU1P47180 YFL002W-AYFL002W-A 5313 nt2.37□□□□□ -2.03
PGU1P47180 YGR161W-BYGR161W-B 5313 nt2.37□□□□□ -2.03
PGU1P47180 YLR410W-BYLR410W-B 5313 nt2.37□□□□□ -2.03
PGU1P47180 YCL019WYCL019W 5313 nt2.37□□□□□ -2.03
PGU1P47180 CPR5YDR304C 678 nt2.37□□□□□ -2.03
PGU1P47180 DYN2YDR424C 279 nt2.37□□□□□ -2.03
PGU1P47180 RMT2YDR465C 1239 nt2.37□□□□□ -2.03
PGU1P47180 MTC7YEL033W 420 nt2.37□□□□□ -2.03
PGU1P47180 YGL039WYGL039W 1047 nt2.37□□□□□ -2.03
PGU1P47180 RPL11BYGR085C 525 nt2.37□□□□□ -2.03
PGU1P47180 SDL1YIL167W 633 nt2.37□□□□□ -2.03
PGU1P47180 RPL11AYPR102C 525 nt2.37□□□□□ -2.03
PGU1P47180 15S_rRNA15S_rRNA 1649 nt2.37□□□□□ -2.03
PGU1P47180 TAF2YCR042C 4224 nt2.37□□□□□ -2.03
PGU1P47180 IKI3YLR384C 4050 nt2.37□□□□□ -2.03
PGU1P47180 PCK1YKR097W 1650 nt2.37□□□□□ -2.03
PGU1P47180 AFR1YDR085C 1863 nt2.37□□□□□ -2.03
PGU1P47180 NCB2YDR397C 441 nt2.36□□□□□ -2.03
PGU1P47180 YFR054CYFR054C 579 nt2.36□□□□□ -2.03
PGU1P47180 YGR228WYGR228W 345 nt2.36□□□□□ -2.03
PGU1P47180 YIL029CYIL029C 429 nt2.36□□□□□ -2.03
PGU1P47180 LSM8YJR022W 330 nt2.36□□□□□ -2.03
PGU1P47180 YJR141WYJR141W 1044 nt2.36□□□□□ -2.03
PGU1P47180 YKR051WYKR051W 1257 nt2.36□□□□□ -2.03
PGU1P47180 ARC18YLR370C 537 nt2.36□□□□□ -2.03
PGU1P47180 RPL23AYBL087C 414 nt2.36□□□□□ -2.03
PGU1P47180 PFY1YOR122C 381 nt2.36□□□□□ -2.03
PGU1P47180 YPL142CYPL142C 318 nt2.36□□□□□ -2.03
PGU1P47180 CCT7YJL111W 1653 nt2.36□□□□□ -2.03
PGU1P47180 NEL1YHR035W 1893 nt2.36□□□□□ -2.03
PGU1P47180 EAP1YKL204W 1899 nt2.36□□□□□ -2.03
PGU1P47180 EXO84YBR102C 2262 nt2.36□□□□□ -2.03
PGU1P47180 STI1YOR027W 1770 nt2.36□□□□□ -2.03
PGU1P47180 SCY1YGL083W 2415 nt2.36□□□□□ -2.03
PGU1P47180 RIX1YHR197W 2292 nt2.35□□□□□ -2.03
PGU1P47180 YAT2YER024W 2772 nt2.35□□□□□ -2.03
PGU1P47180 ARK1YNL020C 1917 nt2.35□□□□□ -2.03
PGU1P47180 RIF1YBR275C 5751 nt2.35□□□□□ -2.03
PGU1P47180 YRR1YOR162C 2433 nt2.35□□□□□ -2.03
PGU1P47180 RSM24YDR175C 960 nt2.35□□□□□ -2.03
PGU1P47180 FAR7YFR008W 666 nt2.35□□□□□ -2.03
PGU1P47180 CPR7YJR032W 1182 nt2.35□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms