Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP13P45452 AC053503.5-201ENST00000601508 636 ntBASIC21.52■■□□□ 1.04
MMP13P45452 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.52■■□□□ 1.04
MMP13P45452 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP13P45452 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP13P45452 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP13P45452 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP13P45452 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP13P45452 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
MMP13P45452 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP13P45452 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP13P45452 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
MMP13P45452 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 MIR935-201ENST00000401179 91 ntBASIC21.5■■□□□ 1.03
MMP13P45452 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.5■■□□□ 1.03
MMP13P45452 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MMP13P45452 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.5■■□□□ 1.03
MMP13P45452 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.5■■□□□ 1.03
MMP13P45452 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MMP13P45452 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP13P45452 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
MMP13P45452 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MMP13P45452 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
MMP13P45452 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP13P45452 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 AC004854.2-201ENST00000608450 1441 ntBASIC21.49■■□□□ 1.03
MMP13P45452 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP13P45452 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
MMP13P45452 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP13P45452 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP13P45452 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MMP13P45452 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP13P45452 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP13P45452 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP13P45452 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.48■■□□□ 1.03
MMP13P45452 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP13P45452 AL049796.1-201ENST00000565336 1766 ntBASIC21.48■■□□□ 1.03
MMP13P45452 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP13P45452 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP13P45452 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
MMP13P45452 AP004607.4-201ENST00000530158 1459 ntBASIC21.48■■□□□ 1.03
MMP13P45452 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP13P45452 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.48■■□□□ 1.03
MMP13P45452 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP13P45452 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.48■■□□□ 1.03
MMP13P45452 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
MMP13P45452 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP13P45452 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MMP13P45452 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP13P45452 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms