Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.31□□□□□ -0.12
RPL13AP40429 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
RPL13AP40429 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPL13AP40429 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPL13AP40429 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPL13AP40429 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL13AP40429 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.31□□□□□ -0.12
RPL13AP40429 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.31□□□□□ -0.12
RPL13AP40429 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RPL13AP40429 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.31□□□□□ -0.12
RPL13AP40429 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
RPL13AP40429 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL13AP40429 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RPL13AP40429 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RPL13AP40429 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.3□□□□□ -0.12
RPL13AP40429 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 YBX1P4-201ENST00000392794 808 ntBASIC14.3□□□□□ -0.12
RPL13AP40429 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.3□□□□□ -0.12
RPL13AP40429 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.3□□□□□ -0.12
RPL13AP40429 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.3□□□□□ -0.12
RPL13AP40429 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.3□□□□□ -0.12
RPL13AP40429 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL13AP40429 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.29□□□□□ -0.12
RPL13AP40429 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RPL13AP40429 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.29□□□□□ -0.12
RPL13AP40429 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.29□□□□□ -0.12
RPL13AP40429 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RPL13AP40429 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.29□□□□□ -0.12
RPL13AP40429 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPL13AP40429 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPL13AP40429 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RPL13AP40429 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.28□□□□□ -0.12
RPL13AP40429 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RPL13AP40429 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms