Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPL3P39023 GABARAPL3-202ENST00000624044 1851 ntBASIC19.66■□□□□ 0.74
RPL3P39023 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RPL3P39023 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RPL3P39023 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RPL3P39023 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL3P39023 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL3P39023 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL3P39023 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPL3P39023 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.65■□□□□ 0.74
RPL3P39023 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.65■□□□□ 0.74
RPL3P39023 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.65■□□□□ 0.74
RPL3P39023 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.65■□□□□ 0.74
RPL3P39023 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
RPL3P39023 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL3P39023 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.65■□□□□ 0.74
RPL3P39023 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RPL3P39023 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.64■□□□□ 0.74
RPL3P39023 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPL3P39023 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPL3P39023 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 AC245052.3-201ENST00000450182 901 ntBASIC19.64■□□□□ 0.73
RPL3P39023 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.64■□□□□ 0.73
RPL3P39023 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RPL3P39023 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPL3P39023 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 AC007225.1-201ENST00000566331 1836 ntBASIC19.63■□□□□ 0.73
RPL3P39023 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RPL3P39023 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.63■□□□□ 0.73
RPL3P39023 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
RPL3P39023 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.63■□□□□ 0.73
RPL3P39023 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 AC123595.1-201ENST00000440769 1046 ntBASIC19.63■□□□□ 0.73
RPL3P39023 AC010141.2-201ENST00000452426 721 ntBASIC19.63■□□□□ 0.73
RPL3P39023 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.63■□□□□ 0.73
RPL3P39023 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RPL3P39023 AL157384.1-201ENST00000445995 2473 ntBASIC19.63■□□□□ 0.73
RPL3P39023 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL3P39023 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPL3P39023 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.62■□□□□ 0.73
RPL3P39023 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
RPL3P39023 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RPL3P39023 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
RPL3P39023 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.62■□□□□ 0.73
RPL3P39023 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPL3P39023 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.62■□□□□ 0.73
RPL3P39023 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL3P39023 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPL3P39023 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.61■□□□□ 0.73
RPL3P39023 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPL3P39023 AP005212.1-201ENST00000581547 1997 ntBASIC19.61■□□□□ 0.73
RPL3P39023 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPL3P39023 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 MIR638-201ENST00000385237 100 ntBASIC19.61■□□□□ 0.73
RPL3P39023 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.61■□□□□ 0.73
RPL3P39023 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L2-201ENST00000561772 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L6-201ENST00000626483 1275 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms