Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.68■□□□□ 0.9
HMGCLP35914 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCLP35914 AL162412.1-201ENST00000567129 965 ntBASIC20.68■□□□□ 0.9
HMGCLP35914 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.68■□□□□ 0.9
HMGCLP35914 AC080038.1-201ENST00000611274 1154 ntBASIC20.68■□□□□ 0.9
HMGCLP35914 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC121338.2-201ENST00000622535 1744 ntBASIC20.67■□□□□ 0.9
HMGCLP35914 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCLP35914 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 AL591742.1-201ENST00000604433 565 ntBASIC20.67■□□□□ 0.9
HMGCLP35914 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCLP35914 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.65■□□□□ 0.9
HMGCLP35914 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 PLK5-205ENST00000642079 1969 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 AC073111.5-205ENST00000641717 521 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HMGCLP35914 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HMGCLP35914 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CDCA4P2-201ENST00000441182 718 ntBASIC20.64■□□□□ 0.89
HMGCLP35914 CDV3P1-201ENST00000471403 739 ntBASIC20.64■□□□□ 0.89
HMGCLP35914 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGCLP35914 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 AC068338.2-201ENST00000563278 1430 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 AC007322.3-201ENST00000426526 701 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 AC007322.1-201ENST00000426983 750 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLP35914 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms