Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRA3P34903 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRA3P34903 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GABRA3P34903 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRA3P34903 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
GABRA3P34903 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
GABRA3P34903 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
GABRA3P34903 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GABRA3P34903 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA3P34903 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA3P34903 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA3P34903 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA3P34903 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRA3P34903 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRA3P34903 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.26■□□□□ 0.67
GABRA3P34903 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.26■□□□□ 0.67
GABRA3P34903 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRA3P34903 RARRES2P11-201ENST00000635158 484 ntBASIC19.26■□□□□ 0.67
GABRA3P34903 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRA3P34903 PLK5-205ENST00000642079 1969 ntBASIC19.26■□□□□ 0.67
GABRA3P34903 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA3P34903 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GABRA3P34903 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.25■□□□□ 0.67
GABRA3P34903 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRA3P34903 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.25■□□□□ 0.67
GABRA3P34903 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRA3P34903 UBE2DNL-204ENST00000602536 740 ntBASIC19.25■□□□□ 0.67
GABRA3P34903 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.25■□□□□ 0.67
GABRA3P34903 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA3P34903 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA3P34903 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA3P34903 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA3P34903 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.24■□□□□ 0.67
GABRA3P34903 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.24■□□□□ 0.67
GABRA3P34903 MIR935-201ENST00000401179 91 ntBASIC19.24■□□□□ 0.67
GABRA3P34903 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.24■□□□□ 0.67
GABRA3P34903 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.24■□□□□ 0.67
GABRA3P34903 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
GABRA3P34903 SLC7A5P1-201ENST00000568957 537 ntBASIC19.24■□□□□ 0.67
GABRA3P34903 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.24■□□□□ 0.67
GABRA3P34903 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GABRA3P34903 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABRA3P34903 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.24■□□□□ 0.67
GABRA3P34903 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA3P34903 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.23■□□□□ 0.67
GABRA3P34903 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA3P34903 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRA3P34903 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 AL162430.1-201ENST00000480705 870 ntBASIC19.23■□□□□ 0.67
GABRA3P34903 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.23■□□□□ 0.67
GABRA3P34903 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 AC137761.2-201ENST00000561729 223 ntBASIC19.23■□□□□ 0.67
GABRA3P34903 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA3P34903 AC145350.3-201ENST00000569033 163 ntBASIC19.23■□□□□ 0.67
GABRA3P34903 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRA3P34903 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA3P34903 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABRA3P34903 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABRA3P34903 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABRA3P34903 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.22■□□□□ 0.67
GABRA3P34903 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.22■□□□□ 0.67
GABRA3P34903 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.22■□□□□ 0.67
GABRA3P34903 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.22■□□□□ 0.67
GABRA3P34903 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABRA3P34903 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms